
Abdominal-B is the last in linkage order and the most posterior acting of the linked homeodomain proteins of the bithorax. Abdominal-B is unique among the homeotics in that it is transcribed in two forms; a regulatory (r) protein and a morphogenic (m) protein. Regulatory transcripts of Abdominal-B act as repressors, suppressing embryonic ventral epidermal structures in the 8th and 9th segments of the abdomen. Thus ABD-B r and m proteins are critically involved in establishing cell fate in the tail segments of the fly.
The distinction between r and m functions was based on the discovery of three classes of regulatory mutations affecting Abdominal-B (Casanova, 1986). One class affects expression in five parasegments (10-14), a second affects expression in only four (parasegments 10-13) and a third class affects expression in just parasegment 14. The regulatory transcript of ABD-B is thought to suppress the proximal morphogenetic (m) function (Casanova, 1986). The smaller r protein differs from its m counterpart in its lack of an M repeat region. This is a particular amino acid segment that lies upstream of the homeobox. The M repeat is rich in glutamines, a classical transcription activation motif (De Lorenzi M., 1988).
Bithorax complex role in segmentation
| Regulatory element | Localisation of element | Trans-regulatory factor (TRANSFAC links) | Reference | ||
| Fab-7 | 5'-flanking region | ?
? hunchback, Kruppel, knirps |
Karch et al., 1994
Busturia & Bienz, 1993 |
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Upstream Genes |
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| cad |
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kni |
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tll | eve | rho |
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trx |
Abdominal-B |
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AbdA | Ubx |
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Dfd | sca | ||||
Downstream Genes |
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The regulation of empty spiracles by Abdominal-B mediates an abdominal segment identity function. Genes Dev 7: 229-240 (1993)
Homeotic control in Drosophila; the scabrous gene is an in vivo target of Ultrabithorax proteins. EMBO J 11: 3375-3384 (1992)
Ectopic expression of UBX and ABD-B proteins during Drosophila embryogenesis: competition, not a functional hierarchy, explains phenotypic suppression. Development 116: 841-854 (1992)
Muscle pattern diversification in Drosophila is determined by the autonomous function of homeotic genes in the embryonic mesoderm. Development 120: 755-768 (1994)
Expression and regulation of the abd-A gene of Drosophila. Development 110: 1197-1207 (1990)
Ectopic expression of UBX and ABD-B proteins during Drosophila embryogenesis: competition, not a functional hierarchy, explains phenotypic suppression. Development 116: 841-854 (1992)
Muscle pattern diversification in Drosophila is determined by the autonomous function of homeotic genes in the embryonic mesoderm. Development 120: 755-768 (1994)
Setting limits on homeotic gene function: restraint of Sex combs reduced activity by teashirt and other homeotic genes. EMBO J 13: 1132-1144 (1994)
Autocatalysis and phenotypic expression of Drosophila homeotic gene Deformed: its dependence on polarity and homeotic gene function. Development 116: 1059-68 (1992)
Silencers in abdominal-B, a homeotic Drosophila gene. EMBO J 12: 1415-1425 (1993)
Regulation of the infraabdominal regions of the bithorax complex of Drosophila by gap genes. Development 121: 1855-1866 (1995)
Silencers in abdominal-B, a homeotic Drosophila gene. EMBO J 12: 1415-1425 (1993)
Regulation of the infraabdominal regions of the bithorax complex of Drosophila by gap genes. Development 121: 1855-1866 (1995)
Silencers in abdominal-B, a homeotic Drosophila gene. EMBO J 12: 1415-1425 (1993)
Regulation of the infraabdominal regions of the bithorax complex of Drosophila by gap genes. Development 121: 1855-1866 (1995)
Regulation of the infraabdominal regions of the bithorax complex of Drosophila by gap genes. Development 121: 1855-1866 (1995)
Control of the initiation of homeotic gene expression by the gap genes giant and tailless in Drosophila. Dev Biol 140: 57-72 (1990)
Silencers in abdominal-B, a homeotic Drosophila gene. EMBO J 12: 1415-1425 (1993)
Enhancer traps in the Drosophila bithorax complex mark parasegmental domains. Genetics 138: 387-399 (1994)
Mapping Polycomb-repressed domains in the bithorax complex using in vivo formaldehyde cross-linked chromatin. Cell 75: 1187-1198 (1993)
Control of the initiation of homeotic gene expression by the gap genes giant and tailless in Drosophila. Dev Biol 140: 57-72 (1990)
Analysis of the genes involved in organizing the tail segments of the Drosophila melanogaster embryo. Mech. Dev. 53: 3-13 (1995)
The Fab-7 element of the bithorax complex attenuates enhancer-promoter interactions in the Drosophila embryo. Zhou J; Barolo S; Szymanski P; Levine M. Genes Dev 10: 3195-3201 (1996)
The Fab-7 element of the bithorax complex attenuates enhancer-promoter interactions in the Drosophila embryo. Zhou J; Barolo S; Szymanski P; Levine M. Genes Dev 10: 3195-3201 (1996)
Trithorax regulates multiple homeotic genes in the bithorax and Antennapedia complexes and exerts different tissue-specific, parasegment-specific and promoter-specific effects on each. Development 117: 119-134 (1993)
Ali, N. and Bienz, M. (1991). Functional dissection of Drosophila abdominal-B protein. Mech Dev 35: 55-64
Andrew, D. J., et al. (1994). Setting limits on homeotic gene function: restraint of Sex combs reduced activity by teashirt and other homeotic genes. EMBO J 13: 1132-44
Bachiller, D., et al. (1994). Conservation of a functional hierarchy between mammalian and insect Hox/HOM genes. EMBO J 13: 1930-41
Benson, G. V., et al. (1996). Mechanisms of reduced fertility in Hoxa-10 mutant mice: uterine homeosis and loss of maternal Hoxa-10 expression. Development 122: 2687-96
Boulet, A. M. Lloyd, A. and Sakonju, S. (1991). Molecular definition of the morphogenetic and regulatory functions and the cis-regulatory elements of the Drosophila Abd-B homeotic gene. Development 111: 393-405
Breen, T. R. and Harte, P. J. (1993). Trithorax regulates multiple homeotic genes in the bithorax and Antennapedia complexes and exerts different tissue-specific, parasegment-specific and promoter-specific effects on each. Development 117: 119-34.
Burke, T. W. and Kadonaga, J. T. (1996). Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters. Genes and Development 10: 711-727
Busturia, A. and Bienz, M. (1993). Silencers in Abdominal-B, a homeotic Drosophila gene. EMBO J 12: 1415-25.
Casanova, J. Sanchez-Herrero, E. and Morata, G. (1986). Identification and characterization of a parasegment specific regulatory element of the Abdominal-B gene of Drosophila. Cell 47: 627-636
Casares, F. and Sanchez-Herrero, E. (1995). Regulation of the infraabdominal regions of the bithorax complex of Drosophila by gap genes. Development 121: 1855-1866.
Castelli-Gair, J., et al. (1994). Dissecting the temporal requirements for homeotic gene function. Development 120: 1983-1995
Celniker, S. E., Keelan, D. J. and Lewis, E. B. (1989). The molecular genetics of the bithorax complex of Drosophila: characterization of the products of the Abdominal-B domain. Genes Dev 3: 1424-36
Crosby, M. A., et al. (1993). The 3' regulatory region of the Abdominal-B gene: genetic analysis supports a model of reiterated and interchangeable regulatory elements. Genetics 134: 809-24
de Lorenzi, M., Ali, N., Saari, G. Henry, C. Wilcox, M.E. and Bienz, M. (1988). Evidence that the Abdominal-B r element function is conferred by a trans-regulatory homeoprotein. EMBO J. 7: 3223-3231
de Lorenzi, M. and Bienz, M. (1990a ). Expression of Abdominal-B homeoproteins in Drosophila embryos. Development 108: 323-9
de Lorenzi, M., et al. (1990b). Evidence that the Abdominal-B r element function is conferred by a trans-regulatory homeoprotein. EMBO J 7: 3223-31
Ekker, S. C., et al. (1994). The degree of variation in DNA sequence recognition among four Drosophila homeotic proteins. EMBO J 13: 3551-3560
Graba, Y., et al. (1992). Homeotic control in Drosophila; the scabrous gene is an in vivo target of Ultrabithorax proteins. EMBO J 11: 3375-84.
Hagstrom, K., Muller, M. and Schedl, P. (1996). Fab-7 functions as a chromatin domain boundary to ensure proper segmentation specification by the Drosophila bithorax complex. Genes Dev. 10: 3203-15
Hendrickson, J. E. and Sakonju, S. (1995). Cis and trans interactions between the iab regulatory regions and abdominal-A and abdominal-B in Drosophila melanogaster. Genetics 139: 835-848
Hopmann, R., Duncan, D. and Duncan, I. (1995). Transvection in the iab-5,6,7 region of the bithorax complex of Drosophila: homology independent interactions in trans. Genetics 139: 815-833
Jones, B. and McGinnis, W. (1993). The regulation of empty spiracles by Abdominal-B mediates an abdominal segment identity function. Genes Dev 7: 229-40.
Karch, F., et al. (1994), Mcp and Fab-7: molecular analysis of putative boundaries of cis-regulatory domains in the bithorax complex of Drosophila melanogaster. Nucleic Acids Res 22: 3138-3146
Kondo, T., et al. (1996). Function of posterior HoxD genes in the morphogenesis of the anal sphincter. Development 122: 2651-59
Kuhn, D. T., et al. (1995). Analysis of the genes involved in organizing the tail segments of the Drosophila melanogaster embryo. Mech. Dev. 53: 3-13
Kuziora, M. A. (1993). Abdominal-B protein isoforms exhibit distinct cuticular transformations and regulatory activities when ectopically expressed in Drosophila embryos. Mech Dev 42: 125-37
Lamka, M. L., Boulet, A. M. and Sakonju, S. (1992). Ectopic expression of UBX and ABD-B proteins during Drosophila embryogenesis: competition, not a functional hierarchy, explains phenotypic suppression. Development 116: 841-54.
Macias, A., Casanova, J. and Morata, G. (1990). Expression and regulation of the abd-A gene of Drosophila. Development 110: 1197-207
McCall, K., O'Connor, M. B. and Bender, W. (1994). Enhancer traps in the Drosophila bithorax complex mark parasegmental domains. Genetics 138: 387-399
Michelson, A. M. (1994). Muscle pattern diversification in Drosophila is determined by the autonomous function of homeotic genes in the embryonic mesoderm. Development 120: 755-768
Orlando, V. and Paro, R. (1993). Mapping Polycomb-repressed domains in the bithorax complex using in vivo formaldehyde cross-linked chromatin. Cell 75: 1187-98
Reinitz, J. and Levine, M. (1990). Control of the initiation of homeotic gene expression by the gap genes giant and tailless in Drosophila. Dev. Biol. 140: 57-72.
Sanchez-Herrero, E. (1991). Control of the expression of the bithorax complex genes abdominal-A and Abdominal-B by cis-regulatory regions in Drosophila embryos. Development 111: 437-49
Small, K. M. and Potter, S. S. (1993). Homeotic transformations and limb defects in Hox A11 mutant mice. Genes Dev 7: 2318-28
Zavortink, M. and Sakonju, S. (1989). The morphogenetic and regulatory functions of the Drosophila Abdominal-B gene are encoded in overlapping RNAs transcribed from separate promoters. Genes Dev 3: 1969-81
Zhou, J., et al. (1996). The Fab-7 element of the bithorax complex attenuate enhancer-promoter interactions in the Drosophila embryo. Genes Dev. 10: 3195-3201
Zhu, A. and Kuziora, M. A. (1996). Homeodomain interaction with the
ß subunit of the general transcription factor TFIIE. J. Biol. Chem.
20993-96
HOM-C
HOX-Pro